CDS

Accession Number TCMCG056C21544
gbkey CDS
Protein Id XP_031396655.1
Location complement(join(2372921..2373017,2373194..2373327,2373456..2373590,2373690..2373838,2373978..2374056,2374159..2374311,2374421..2374477,2374568..2374677,2374826..2374925,2375031..2375237,2375568..2376068))
Gene LOC116207720
GeneID 116207720
Organism Punica granatum

Protein

Length 573aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA580467
db_source XM_031540795.1
Definition prolycopene isomerase, chloroplastic isoform X3 [Punica granatum]

EGGNOG-MAPPER Annotation

COG_category H
Description isomerase
KEGG_TC -
KEGG_Module M00097        [VIEW IN KEGG]
KEGG_Reaction R07512        [VIEW IN KEGG]
KEGG_rclass RC01960        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K09835        [VIEW IN KEGG]
EC 5.2.1.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00906        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
map00906        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009657        [VIEW IN EMBL-EBI]
GO:0009662        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016491        [VIEW IN EMBL-EBI]
GO:0016853        [VIEW IN EMBL-EBI]
GO:0016859        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046608        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCCGAGCGGCTCTGCTTCTGTTCATCCTTTTGTCTCAGTCCCCCGTTCTCCGCTCACCCAGAAAGACCCACCGCCCAGAGCCCCGGCCTTCCCCATCTCCGCCCCATCGGCGTTGCTGATGCTTGCTACGTCTCAAGTTCCCACCTTTTGGAGCTCAGCAGCTCCCACCTATTTGGCCGGCACAAACCCAGAACCCAGAGCAGCTGGGGAGCTCGAGCTTCTCCCGGGAGCTCAAACTCCAGGGTCCGTTCACAGGCGGTCCTGAGCCCGGACAAGGCAGCGGAGAGGGGAGGACTGAGCGGGGAGGCTTATTATGACGCCATTGTTATCGGGTCGGGGATTGGTGGGCTGGTGGCCGCGACTCAGCTCGCGGTGAAGGGAGCTAGGATTCTTGTTCTTGAGAAGTACGTGATTCCTGGTGGGAGCTCCGGGTATTATGAGAGGGACGGGTATACTTTCGACGTTGGGTCTTCTGTGATGTTCGGTTTCAGTGACAAGGGAAACCTAAATTTGATAACCCAAGCATTGGCGGCAGTTGGTTGCAAGATGGAGGTCATACCTGATCCAACGACTGTCCATTTCCATCTACCAAACGACCTTTCTGTTCAAGTCCACAGGGGGTATGGTGAATTTATTGGAGAGTTGATCAGCAAGTTTCCACATGAAAAGGGGGGGATACTCAAATTCTATGGCGAGTGTTGGAAGATCTTTAATGCCTTGAACTCGCTGGAGCTAAAGTCGCTCGAGGAGCCACTCTACCTTTTCGGACAATTCTTTCAGAAGCCGATTGAATGTTTAACCCTTGCGTATTACCTACCCCAGAATGCTGGAGACATAGCTCGGAAGTACATCAAGGATCCCCAGTTGTTGTCTTTCATTGATGCCGAGGTGAGACAGAAGGGGAAAAGAAAAAAGTGTTTTATAGTCAGCACAGTTAACGCACTCCAGACTCCAATGATAAATGCAAGCATGGTCCTATGTGACAGGCACTTTGGAGGAATTAACTACCCTGTAGGAGGTGTTGGAGGAATTGCAAAATCCTTGGCGAAGGGGTTAGTTGATAAGGGGAGTGAAATACTGTACAGAGCAAACGTGACTGATATCATTGTCGAGAATGGGAAGGCTGTAGGAGTCAGGCTCTCTGGTGGAAGGCAGTTCTTTGCTAAAACAATAATATCTAACGCTACAAGATGGGACACATTTGGGAAGTTGTTGAAAGGAGAAAACCTTCCGAAAGAAGAGAGGGATTTTCAAAAGCGGTATGTTAAGGCTCCGTCTTTTCTATCCATCCACATGGGGGTGAAAGCTGAGGTTTTGCCACCAGAAACAGATTGCCATCATTTTGTTCTTGAGGATTCGTGGTCAAGATTGGAAGAGCCGTATGGAAGTATATTCTTAAGCATTCCAACTGTCCTGGACCCGTCTTTAGCTCCAGAAGGGCGCCATATACTACACATATTCACGACTTCTTCCATCGAAGATTGGGAGGGTCTCCCACGGCAAGAATATGAGGCAAAAAAGGAAAAGGTTGCAGATGAAATTATAAGGAGATTAGAAAAGAAGCTATTTCCAGGTCTCCAGTCTTCCATTACTTTTGTGGAGGTATTGCCTTCTCCTTCGTGTACGGGAGCTGTACATAACCGATTAAAACCTAAATCGAGCTGGAATGAAGTTGCCTTTGACTCTCTAGGGCCCAATCTGTTATTTCGGAACCATTAA
Protein:  
MAERLCFCSSFCLSPPFSAHPERPTAQSPGLPHLRPIGVADACYVSSSHLLELSSSHLFGRHKPRTQSSWGARASPGSSNSRVRSQAVLSPDKAAERGGLSGEAYYDAIVIGSGIGGLVAATQLAVKGARILVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCKMEVIPDPTTVHFHLPNDLSVQVHRGYGEFIGELISKFPHEKGGILKFYGECWKIFNALNSLELKSLEEPLYLFGQFFQKPIECLTLAYYLPQNAGDIARKYIKDPQLLSFIDAEVRQKGKRKKCFIVSTVNALQTPMINASMVLCDRHFGGINYPVGGVGGIAKSLAKGLVDKGSEILYRANVTDIIVENGKAVGVRLSGGRQFFAKTIISNATRWDTFGKLLKGENLPKEERDFQKRYVKAPSFLSIHMGVKAEVLPPETDCHHFVLEDSWSRLEEPYGSIFLSIPTVLDPSLAPEGRHILHIFTTSSIEDWEGLPRQEYEAKKEKVADEIIRRLEKKLFPGLQSSITFVEVLPSPSCTGAVHNRLKPKSSWNEVAFDSLGPNLLFRNH